kinetic-modeling
High-performance sensitivity analysis for large ordinary differential equation models
PyEMMA: Emma's Markov Model Algorithms
The official PySCeS project source code repository.
A Python Framework for Modeling and Analysis of Signaling Systems
StochPy (Stochastic modeling in Python) provides several stochastic simulation algorithms to simulate (bio)chemical systems of reactions in a stochastic manner.
MEWpy - Metabolic Engineering in Python
Patient-Specific Modeling in Python
Modeling molecular ensembles with scalable data structures and parallel computing
A package to build, run and optimise a kinetic multi-layer model for aerosol particles and films
