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K Mers Python Packages

Python packages with the GitHub topic k-mers. Sorted by relevance, with stars and monthly downloads.
prophyle
prophyle

Accurate, resource-frugal and deterministic DNA sequence classifier.

1K 36 5
liaoherui
strainscan

One efficient and accurate strain-level microbiome composition analysis tool based on reference genomes and k-mers.

311 43 7
spacegraphcats
spacegraphcats

Indexing & querying large assembly graphs -- in space, no one can hear you miao!

307 119 15
microbial-pangenomes-lab
panfeed

Compute gene-cluster specific k-mers over a pangenome

302 9 0
    • Data from PyPI, GitHub, ClickHouse, and BigQuery