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K Mer Python Packages

Python packages with the GitHub topic k-mer. Sorted by monthly downloads, with stars and forks.
CamilaDuitama
decom

🗑️🦷 decOM 🦷🗑️

562 6 2
johnlees
poppunk

PopPUNK 👨‍🎤 (POPulation Partitioning Using Nucleotide Kmers)

277 112 23
liaoherui
virstrain

An RNA virus strain-level identification tool for short reads.

139 23 2
MatthewRalston
kmerdb

Python CLI for alignment-free genomics.

21 13 1
mgalardini
pyseer

SEER, reimplemented in python 🐍🔮

0 140 32
    • Original data from PyPI, GitHub, and OSV; downloads served through ClickHouse
    • Sources & methodology