Immunopeptidomics Python Packages

iptkl

A pythonic library for analysing immunopeptidomic experiments

protpeptigram

Visualization of Immunopeptides Mapped to Source Proteins Across Multiple Samples

mhc-tp

Peptides motif search tool and Source protein mappers

fennet

Foundation model for MHC class I peptide binding prediction built on deep contrastive learning.

pdeep

Foundation model for MHC class I peptide binding prediction built on deep contrastive learning.

fennomix-mhc

Foundation model for MHC class I peptide binding prediction built on deep contrastive learning.

fennet-mhc

Foundation model for MHC class I peptide binding prediction built on deep contrastive learning.