Immunoinformatics Python Packages

lzgraphs

LZ76 Graphs and Applications in Immunology

tidytcells

Standardise TR/MH/IG data

iptkl

A pythonic library for analysing immunopeptidomic experiments

setriq

Fast string distance computation in Python

protpeptigram

Visualization of Immunopeptides Mapped to Source Proteins Across Multiple Samples

algpred2

A tool to predict allergenic proteins and mapping of IgE epitopes

ifnepitope2

Prediction of interferon-gamma inducing peptides using alignment-based and alignment-free methods

clbtope

CLBTope:A computational approach had been developed for predicting both types (linear/conformational) of B-cell epitopes.

sceptr

Highly informative TCR representation model

pygempick

Open Source python module to enable batch gold particle picking, filtering, processing & statistical modelling of TEM images produced by IGEM (immunogold electron microscopy).

pybatman

Package for predicting peptide mutation effects on T cell receptor activation.

il5pred

Machine learning based method for predicting and scanning IL-5 inducing petides

il13pred

A tool for predicting immunoregulatory cytokine IL-13 inducing peptides

il6pred

In silico model for predicting of Interleukin-6 inducing peptides