Image Registration Python Packages

vismatch

Wrapper of 50+ image matching models with a unified interface

smriprep

Structural MRI PREProcessing (sMRIPrep) workflows for NIPreps (NeuroImaging PREProcessing tools)

gryds

Gryds: a Python package for geometric transformations of images

icon-registration

A library for performing image registration using deep learning, regularized by inverse consistency

multiview-stitcher

A Python toolbox for aligning / fusing / stitching large multi-view / multi-positioning image datasets in 2-3D.

voxelmorph

Unsupervised Learning for Image Registration

itk-tubetk

TubeTK is an open-source toolkit for the segmentation, registration, and analysis of tubes and surfaces in images, developed by Kitware, Inc.

zcmir

Zig cross modality image registration.

shinestacker

Focus stacking software with an interactive GUI and Python API for advanced image processing workflows

stabilo

⚖️ Python library for stabilizing video frames or object trajectories relative to a chosen reference frame, using classical or deep-learning feature matching with robust homography/affine estimation, optional CUDA acceleration, and user-defined exclusion masks, built for dynamic scenes with moving objects.

pyxel-dic

Python FE-DIC library

itk-twoprojectionregistration

ITK-Based Implementation of Two-Projection 2D/3D Registration Method with an Application in Patient Setup for External Beam Radiotherapy

smriprep-docker

Structural MRI PREProcessing (sMRIPrep) workflows for NIPreps (NeuroImaging PREProcessing tools)

zenreg

ZenReg is a Python-based high-throughput, memory-efficient pipeline for N-dimensional image registration, designed for large microscopy and imaging datasets.

motionsegmentation

Motion correction, explicit spatio-temporal regularization of motion tracking, random speckles enhancement, and segmentation.

imreg

FFT based image registration.

itk-ndreg

This is the Neurodata open-source Python package that performs affine and deformable (LDDMM) image registration.

hf-deepali

Image, point set, and surface registration in PyTorch.

spm12

Python wrapper around MATLAB and SPM12

fuelgauge

Open-source computer vision that turns any fixed camera into a calibrated sensor: pose from the skyline, decades of footage on one view, every pixel on the map. Live on 8 wildfire cameras.

starsalign

A package for registration of wide range astronomical images of stars, galaxies and clusters using SIFT, FLANN and RANSAC algorithms for extreme precision applications

coregix

Pairwise GeoTIFF coregistration for geospatial imagery

imzdesk

WSI-MSI Workbench

image-matching-models

Wrapper of 50+ image matching models with a unified interface