Image Registration Python Packages

voxelmorph

Unsupervised Learning for Image Registration

gryds

Gryds: a Python package for geometric transformations of images

smriprep

Structural MRI PREProcessing (sMRIPrep) workflows for NIPreps (NeuroImaging PREProcessing tools)

multiview-stitcher

A Python toolbox for aligning / fusing / stitching large multi-view / multi-positioning image datasets in 2-3D.

vismatch

Wrapper of 50+ image matching models with a unified interface

icon-registration

A library for performing image registration using deep learning, regularized by inverse consistency

itk-tubetk

TubeTK is an open-source toolkit for the segmentation, registration, and analysis of tubes and surfaces in images, developed by Kitware, Inc.

stabilo

🌀 Python library for stabilizing video frames or object trajectories relative to a chosen reference frame, using feature matching with robust homography/affine estimation and user-defined exclusion masks, ideal for dynamic scenes with moving objects.

shinestacker

Focus stacking software with an interactive GUI and Python API for advanced image processing workflows

image-matching-models

Wrapper of 50+ image matching models with a unified interface

motionsegmentation

Motion correction, explicit spatio-temporal regularization of motion tracking, random speckles enhancement, and segmentation.

itk-twoprojectionregistration

ITK-Based Implementation of Two-Projection 2D/3D Registration Method with an Application in Patient Setup for External Beam Radiotherapy

imreg

FFT based image registration.

pyxel-dic

Python FE-DIC library

atlalign

Blue Brain multi-modal registration and alignment toolbox

hf-deepali

Image, point set, and surface registration in PyTorch.

smriprep-docker

Structural MRI PREProcessing (sMRIPrep) workflows for NIPreps (NeuroImaging PREProcessing tools)

itk-ndreg

This is the Neurodata open-source Python package that performs affine and deformable (LDDMM) image registration.

coregix

Pairwise raster coregistration for geospatial imagery

spm12

Statistical Parametric Mapping

starsalign

A package for registration of wide range astronomical images of stars, galaxies and clusters using SIFT, FLANN and RANSAC algorithms for extreme precision applications

napari-stitcher

A napari plugin for stitching large multi-positioning datasets in 2/3D+t using multiview-stitcher

fused-lncc

Fully-fused 3D Local Normalized Cross-Correlation loss (CUDA)

imageregistrationhelper

Register your images with interactive widgets in Jupyter notebooks