Hpo Python Packages

pyhpo

A Python library to work with, analyze, filter and inspect the Human Phenotype Ontology

gpsea

A Python library for discovery of genotype-phenotype associations

hpo-drift

Diff two HPO releases for YOUR terms: renames, obsoletions, and how Resnik/Lin similarity drifts

evorl-jax

EvoRL is a fully GPU-accelerated framework for Evolutionary Reinforcement Learning, implemented with JAX. It supports Reinforcement Learning (RL), Evolutionary Computation (EC), Evolution-guided Reinforcement Learning (ERL), AutoRL, and seamless integration with GPU-optimized simulation environments.

auptimizer

An automatic ML model optimization tool.

phenopy

Phenotype comparison tools using semantic similarity

phenotopo

A QC and explainability toolkit for phenotype cohorts: HPO/Phenopacket quality control, annotation-bias checks, outliers, ontology-aware group comparison and robust cohort structure.

hpoglue

HPO tool with a modular API that allows for the easy interfacing of a new Optimizer and a new Benchmark

genophenocorr

A Python library for discovery of genotype-phenotype associations

het-ai

HeT-FTI MLOps all-in-one Solution

hposuite

A lightweight framework for benchmarking HPO algorithms

ugle

Python Framework for An Investigation into Unsupervised GNN Learning Environments

spax

Pythonic, type-safe search space configuration for HPO (hyperparameter optimization), NAS (neural architecture search), and ML experiment tracking. Define complex search spaces with conditional parameters, automatic validation, and zero boilerplate. Pydantic-based, Optuna-ready to nail hyperparameter tuning.

autotabular

Automatic machine learning for tabular data. ⚡🔥⚡