Hpo Python Packages

pyhpo

A Python library to work with, analyze, filter and inspect the Human Phenotype Ontology

gpsea

A Python library for discovery of genotype-phenotype associations

auptimizer

An automatic ML model optimization tool.

phenopy

Phenotype comparison tools using semantic similarity

hpoglue

HPO tool with a modular API that allows for the easy interfacing of a new Optimizer and a new Benchmark

hposuite

A lightweight framework for benchmarking HPO algorithms

genophenocorr

A Python library for discovery of genotype-phenotype associations

autotabular

Automatic machine learning for tabular data.

ugle

Python Framework for An Investigation into Unsupervised GNN Learning Environments

spax

Pythonic, type-safe search space configuration for HPO (hyperparameter optimization), NAS (neural architecture search), and ML experiment tracking. Define complex search spaces with conditional parameters, automatic validation, and zero boilerplate. Pydantic-based, Optuna-ready to nail hyperparameter tuning.