homology
A Lean Persistent Homology Library for Python
Distances and representations of persistence diagrams
Topological Data Analysis for Python🐍
Topological Data Analysis in Python: Simplicial Complex
Use Thor's Axe to cut exons into their evolutionary building blocks :zap:
Feature-aware orthology prediction tool. Provided data package: Quest for Orthologs reference gene sets 2019.
Topology-aware ML toolkit plus preregistered graph-classification study; honest negative result, statistical harness, reproducible evidence.
Homology-based PPI prediction toolkit
UDiPH is a package that creates a new metric space where the points are uniformly sampled with respect to a global metric. It is oriented for creating Vietoris-Rips filtrations that are independent of the metric of the initial space.
