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Homology Python Packages

Python packages with the GitHub topic homology. Sorted by relevance, with stars and monthly downloads.
scikit-tda
ripser

A Lean Persistent Homology Library for Python

89K 335 64
scikit-tda
persim

Distances and representations of persistence diagrams

84K 139 57
scikit-tda
scikit-tda

Topological Data Analysis for Python🐍

2K 573 55
smaniches
topogeoml

Topology-aware ML toolkit plus preregistered graph-classification study; honest negative result, statistical harness, reproducible evidence.

1K 1 0
PhyloSofS-Team
thoraxe

Use Thor's Axe to cut exons into their evolutionary building blocks :zap:

492 12 5
BIONF
h1s

Feature-aware orthology prediction tool

436 9 2
stephenhky
mogutda

Topological Data Analysis in Python: Simplicial Complex

430 123 22
BIONF
hamstr1s

Feature-aware orthology prediction tool

253 9 2
Antonio-Leitao
udiph

UDiPH is a package that creates a new metric space where the points are uniformly sampled with respect to a global metric. It is oriented for creating Vietoris-Rips filtrations that are independent of the metric of the initial space.

80 4 0
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