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Hmmer Python Packages

Python packages with the GitHub topic hmmer. Sorted by relevance, with stars and monthly downloads.
althonos
pyhmmer

Cython bindings and Python interface to HMMER3.

2.7M 163 17
K-nie
genome-format-converters

A unified Python CLI for 30 bioinformatics file-format conversions (VCF, GFF3, GTF, BED, GenBank, FASTA, FASTQ, BAM, EIGENSTRAT, PLINK, MAF, MUMmer, HMMER, Newick) with consistent flags, batch mode, and a published Stage 1 benchmark vs convertf, plink2, AGAT, gffread, UCSC, EMBOSS, pyhmmer.

195 1 0
althonos
pyhmmer-arm

Cython bindings and Python interface to HMMER3.

50 163 17
robaina
pynteny

Query sequence database by HMMs arranged in predefined synteny structure

4 14 1
    • Data from PyPI, GitHub, ClickHouse, and BigQuery