Hmm Python Packages

reacnetgenerator

an automatic reaction network generator for reactive molecular dynamics simulation

leuvenmapmatching

Leuven.MapMatching toolbox for aligning GPS measurements to locations on a map.

pyemma

🚂 Python API for Emma's Markov Model Algorithms 🚂

libfmp

A Python package for teaching and learning Fundamentals of Music Processing (FMP)

mgnifam

Build protein families from sequence clusters by iterative HMM search over very large databases — streaming, deterministic, pyHMMER-based.

gotrackit

Map Matching Python Package Based on Hidden Markov Model(HMM)

microhmm

一个微型的基于 Python 的 HMM (隐马尔可夫模型) 包 | A micro python package for HMM (Hidden Markov Model)

msmbuilder

:building_construction: Statistical models for biomolecular dynamics :building_construction:

sequentia

Scikit-Learn compatible HMM and DTW based sequence machine learning algorithms in Python.

chainsaddiction

Discrete-time, finite state space, stationary Hidden Markov Model for Python3.

mchmm

Markov Chains and Hidden Markov Models in Python

chadhmm

Yet another implementation of Hidden (Semi-) Markov Models in PyTorch with several extensions. Feel free to contribute.

insurance-telematics

HMM-based telematics risk scoring for insurance pricing — driving state classification from raw trip data to GLM-compatible features

bhmm

Bayesian hidden Markov models toolkit

pymc3-hmm

Hidden Markov models in PyMC3

topoconscious

Persistent homology pipeline for detecting neural correlates of consciousness from fMRI — H0/H1/H2, Wasserstein + Müller-Lyer timelines, HMM decoding, topological transfer entropy.

conodictor

ConoDictor predicts conopeptides superfamily using generalized profiles and hidden Markov models.

bayesian-hmm

A non-parametric Bayesian approach to Hidden Markov Models

nautilus-spark

India Macro-Regime Platform - 5-state Gaussian HMM

fasthmm

A python package for HMM model with fast train and decoding implementation

pytrain

Machine Learning library for python

nlptoolkit-hmm

Hidden Markov Model Library

nlptoolkit-hmm-cy

Hidden Markov Model Library

tensorflow-hmm

A tensorflow implementation of an HMM layer