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Hiv Python Packages

Python packages with the GitHub topic hiv. Sorted by relevance, with stars and monthly downloads.
mmdebrahimi
dna-decode

Deterministic, interpretable genome→phenotype decoder: calls antibiotic/antiviral/antifungal resistance from DNA + names the exact genes/mutations driving each call. Spans bacteria, M. tuberculosis, fungi, HIV-1 & SARS-CoV-2 — independently validated on FREE measured wet-lab labels (EBI AMR Portal, Stanford HIVDB). Not a clinical tool.

3K 0 0
EMOD-Hub
emod-malaria

Source files for building the IDM EMOD disease transmission model.

2K 106 53
EMOD-Hub
emod-hiv

Source files for building the IDM EMOD disease transmission model.

2K 106 53
EMOD-Hub
emod-common

Source files for building the IDM EMOD disease transmission model.

1K 106 53
mapitio
mapitio-edc

Retrospective HIV Cohort for Diabetes Research

287 1 0
evolbioinfo
jphmm-tools

Tools for extracting information from jpHMM (http://jphmm.gobics.de) output.

268 0 0
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