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High Throughput Sequencing Python Packages

Python packages with the GitHub topic high-throughput-sequencing. Sorted by relevance, with stars and monthly downloads.
guma44
geoparse

Python library to access Gene Expression Omnibus Database (GEO)

52K 160 51
USDA-VS
vsnpdev

vSNP -- validate SNPs

285 23 12
weng-lab
umitools

A toolset for handling sequencing data with unique molecular identifiers (UMIs)

127 17 4
zavolanlab
multiqc-plugins

MultiQC plugins for the Zavolan Lab @ University of Basel, Switzerland

110 1 0
zavolanlab
htsinfer

Infer metadata for your downstream analysis straight from your RNA-Seq data

89 15 22
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