Healthcare Python Packages

fhir-resources

FHIR Resources https://www.hl7.org/fhir/resourcelist.html

pysof

The Helios FHIR Server is an implementation of the HL7® FHIR® standard, built in Rust for high performance and optimized for clinical analytics workloads.

icd10-cm

ICD-10 CM medical classification list by the World Health Organization

x12sdk

Synthetic HIPAA X12 files (837, 835, 834, 270/271, 276/277) with no PHI, plus typed Pydantic v2 models to parse, validate and write them. Maintained continuation of LinuxForHealth x12.

clinical-ai-reliability

Open-source reliability framework for medical and health AI systems.

finerx-mcp

MCP server for FineRx: observed US prescription prices by pharmacy with dates, the free discount card, US equivalents of foreign-brand medicines, 12 languages. Thin client over the public REST API.

pytrials

Python package that wraps around the ClinicalTrials.gov API

meds-reader

A high-performance database and Python reader interface for MEDS datasets

hl7parser

a simple hl7-parser

medpython

Medial Research Libs Infrastructure

oxedi835

Read and write X12 EDI 835 remittance files as tables — Python, DuckDB SQL, lossless, fast

senaite-health

SENAITE LIMS extension for Health Care labs

pyhealth

A Deep Learning Python Toolkit for Healthcare Applications.

stepcount

Improved Step Counting via Foundation Models for Wrist-Worn Accelerometers

actinet

An activity classification model based on self-supervised learning for wrist-worn accelerometer data.

pdf-anonymizer-core

CLI, Web API, and an SDK anonymizing large PDF files, Excel, Word docs, CSVs

pdf-anonymizer-cli

CLI, Web API, and an SDK anonymizing large PDF files, Excel, Word docs, CSVs

omh-shim

Convert wearable health data from vendor schemas to Open mHealth schemas.

messagefoundry

MessageFoundry Healthcare Interface Engine

pycyclops

A toolkit for evaluating and monitoring AI models in clinical settings

omophub

Python SDK for OMOP/OHDSI vocabularies - query 11M+ medical concepts across SNOMED, ICD-10, RxNorm, LOINC & 120+ terminologies via simple API

oxedi

Read and write X12 EDI 835 remittance files as tables — Python, DuckDB SQL, lossless, fast

faker-healthcare-provider

🏥 Faker provider for generating healthcare fake data - diseases, ICD-10, drugs, procedures

taiwan-fda-mcp

Trustworthy Taiwan FDA (TFDA) drug-information lookup for AI agents — an independent open-source MCP server (not an official TFDA product). 為 AI 代理人打造的非官方台灣食藥署 (TFDA) 藥物資訊查詢工具，獨立開源 MCP server。