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Hdf5 Format Python Packages

Python packages with the GitHub topic hdf5-format. Sorted by monthly downloads, with stars and forks.
kevinhu
cancer-data

A unified downloader+preprocessor for cancer genomics datasets

386 16 7
algotom
broh5

Browser-based GUI HDF Viewer https://broh5.readthedocs.io

347 15 1
FA387
cascade-mea

CASCADE (Criticality Avalanche Spike Cross-platform Analysis Detection Engine) is a unified Python pipeline for MEA electrophysiology analysis. Supports multiple manufacturers, detects neuronal avalanches, and computes criticality metrics including DCC, branching ratio, and shape collapse.

101 4 0
CSChisholm
xmds2tools

Tools to read .hdf5 and .xsil files generated using XMDS2 and functions to implement Bessel transformations and Bessel quadrature integration

58 0 0
PIC-IRIS
ph5

Library of PH5 clients, apis, and utilities

49 16 8
    • Original data from PyPI, GitHub, and OSV; downloads served through ClickHouse
    • Sources & methodology