Hdbscan Python Packages

genieclust

Genie: Fast and Robust Hierarchical Clustering

quitefastmst

quitefastmst: Euclidean and Mutual Reachability Minimum Spanning Trees

clumppy

Clustering algorithms

vector-inspector

A comprehensive desktop application for visualizing, querying, and managing vector database data

hdbscan-rs

High-performance HDBSCAN clustering in Rust

topicmodeltuner

HDBSCAN Tuning for BERTopic Models

simpletopicmodel

An NLP Package for generating Topic Models

lumbermark

Lumbermark: Resistant Clustering via Chopping Up Mutual Reachability Minimum Spanning Trees

faultmap

Automatically discover where and why your LLM is failing — embedding-space clustering + statistical hypothesis testing to surface input slices with elevated failure rates and audit test suite coverage gaps.

obsidian-umbra

Turn any Obsidian vault into a Zettelkasten graph — locally, with a dozen years of notes in minutes. 4-phase pipeline: daily splitter (Qwen3-4B) → semantic backlinks (Potion-32M) → keyword linker → synonym clustering (GTE-large + HDBSCAN). Zero cloud.

neural-map

NeuralMap is a data analysis tool based on Self-Organizing Maps

clustviz

Visualization of many Clustering Algorithms, via Notebook or GUI

locatecolorcluster

Lightning-fast image color clustering with C-based RGB localization/euclidean distance calculation. Supports DBSCAN/HDBSCAN, Shapely geometry.

cyhdbscan

Very fast hdbscan for Python - written in Cython/C++

optuclust

Optuna-tuned clustering