Hdbscan Python Packages

quitefastmst

quitefastmst: Euclidean and Mutual Reachability Minimum Spanning Trees

lumbermark

Lumbermark: Resistant Clustering via Chopping Up Mutual Reachability Minimum Spanning Trees

genieclust

Genie: Fast and Robust Hierarchical Clustering

betula-cluster

Memory-bounded clustering for large embeddings and tabular streams: BETULA cluster features in a Rust core, then k-means / GMM / Ward / spectral / Leiden / HDBSCAN on the compressed summary. Streaming partial_fit, scikit-learn API, PyO3, no LAPACK or SciPy at runtime.

clumppy

Clustering algorithms

hdbscan-rs

High-performance HDBSCAN clustering in Rust

vector-inspector

The missing developer tool for working with vector databases. A comprehensive desktop app for visualizing, querying, and managing vector data.

topicmodeltuner

HDBSCAN Tuning for BERTopic Models

erotica

Gaia open-cluster analysis in Python: HDBSCAN membership with calibrated probabilities, unbinned Poisson point-process radial profiles (King, EFF, Plummer, King+corona) in PyMC, DR3 selection functions, isochrones, dynamics, and an identifiability toolkit that asks whether a parameter is measured before it is quoted.

simpletopicmodel

Easily identifying themes in text

tgmm

tgmm: A Gaussian Mixture Model based on Expectation-Maximisation implemented with PyTorch

faultmap

Automatically discover where and why your LLM is failing — embedding-space clustering + statistical hypothesis testing to surface input slices with elevated failure rates and audit test suite coverage gaps.

lakshana

Zero-config schema discovery for document collections. Drop a folder of PDFs, get a JSON Schema.

obsidian-umbra

Turn any Obsidian vault into a Zettelkasten graph — locally, with a dozen years of notes in minutes. 4-phase pipeline: daily splitter (Qwen3-4B) → semantic backlinks (Potion-32M) → keyword linker → synonym clustering (GTE-large + HDBSCAN). Zero cloud.

neural-map

NeuralMap is a data analysis tool based on Self-Organizing Maps

cyhdbscan

Very fast hdbscan for Python - written in Cython/C++

optuclust

Optuna-tuned clustering

clustviz

Visualization of many Clustering Algorithms, via Notebook or GUI

locatecolorcluster

Lightning-fast image color clustering with C-based RGB localization/euclidean distance calculation. Supports DBSCAN/HDBSCAN, Shapely geometry.

neural-map-franco-bobadilla

NeuralMap is a data analysis tool based on Self-Organizing Maps