Gtdb Python Packages

gtdb-tree

A library for parsing Newick format files, especially GTDB tree files.

cazy-webscraper

Web scraper to retrieve protein data catalogued by the CAZy, UniProt, NCBI, GTDB and PDB websites/databases.

multitax

Python package to obtain, parse and explore biological and custom taxonomies.

flextaxd

FlexTaxD (Flexible Taxonomy Databases) - Create, add, merge different taxonomy sources (QIIME, GTDB, NCBI and more) and create metagenomic databases (kraken2, ganon and more )