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Gsea Python Packages

Python packages with the GitHub topic gsea. Sorted by monthly downloads, with stars and forks.
zqfang
gseapy

Gene Set Enrichment Analysis in Python

242K 710 145
DBRetina
dbretina

DBRetina Python Package

2K 1 3
krassowski
gsea-api

Pandas API for multiple Gene Set Enrichment Analysis implementations in Python (GSEApy, cudaGSEA, GSEA)

396 16 2
noamteyssier
idea-bio

Integrated Differential Expression and Annotation

325 7 0
shayuanxukuang
pyfgsea

Fast preranked GSEA and rolling-window trajectory enrichment with a Rust core.

294 2 0
genepattern
scgsea

A version of Single Sample GSEA adapted to the sparsity of single cell RNA-seq data

95 0 0
jsmccabe1
sceptr-profiling

Continuous enrichment profiling for transcriptomes. Characterise how functional programmes are distributed across the expression gradient, with built-in significance testing for single samples. Great for non-model organisms, clinical isolates, and unreplicated datasets.

56 6 0
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