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Gillespie Algorithm Python Packages

Python packages with the GitHub topic gillespie-algorithm. Sorted by monthly downloads, with stars and forks.
twallema
pysodm

Simulating and Optimising Dynamical Models in Python 3

165 9 2
SergioPachonDotor
toymaker

This library is designed to facilitate research of stochasticity effects in genetic circuits

136 2 0
mauricelanghinrichs
memocell

Bayesian inference of stochastic cellular processes with and without memory in Python.

129 1 1
clauswilke
pinetree

🌲 a flexible gene expression simulator with codon-specific translation rates

118 14 5
wcota
dynsis

Implementation of SIS epidemic model for large and heterogeneous networks using Fortran.

98 13 2
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