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Genomic Selection Python Packages

Python packages with the GitHub topic genomic-selection. Sorted by monthly downloads, with stars and forks.
FJingxian
janusx

A high-performance, ALL-in-ONE suite for quantitative genetics that unifies genome-wide association studies (GWAS) and genomic selection (GS).

3K 41 7
ou6326
pygapit-ng

Python implementation of GAPIT 3.5 for GWAS and genomic prediction, with disk-backed NumPy, HDF5, and Zarr workflows.

2K 0 0
Foggalong
robustocs

Robust optimal contirbution selection problems for genetics with Python

126 6 3
grimmlab
easypheno

easyPheno: a model agnostic phenotype prediction framework

97 16 5
josh45-source
gsbench

The package is a CLI tool for benchmarking genomic selection models in plant breeding.

81 2 0
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