PyRank

Genomic Intervals Python Packages

Python packages with the GitHub topic genomic-intervals. Sorted by monthly downloads, with stars and forks.
open2c
bioframe

Genomic interval operations on Pandas DataFrames

37K 196 36
biodatageeks
polars-bio

Blazing-Fast Bioinformatic Operations on Python DataFrames

12K 204 34
databio
bbconf

Configuration package for bedbase project

2K 0 2
databio
bedboss

Python pipeline for processing BED files for BEDbase

1K 3 0
databio
bedms

Tool for standardization of genomics/epigenomics metadata

201 3 0
databio
attribute-standardizer

Tool for standardization of genomics/epigenomics metadata

105 3 0
ngualand
prooverlap

ProOvErlap - Assessing feature proximity/overlap and testing statistical significance from genomic intervals

102 1 0