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Genomes Python Packages

Python packages with the GitHub topic genomes. Sorted by monthly downloads, with stars and forks.
mad-lab
tnseq-transit

Repository for the TRANSIT and TPP tools developed by the Ioerger Lab

2K 23 20
broadinstitute
gnomad

Hail helper functions for the gnomAD project and Translational Genomics Group

2K 102 32
NickJD
storf-reporter

Package to extract Unannotated Regions from prokaryotic genomes report coding and pseudogenised genes delimited by stop codons - Named StORFs (Stop - Open Reading Frames)

2K 17 2
kishwarshafin
helen

H.E.L.E.N. (Homopolymer Encoded Long-read Error-corrector for Nanopore)

300 73 12
mad-lab
transit1

Repository for the TRANSIT and TPP tools developed by the Ioerger Lab

170 23 20
broadinstitute
cpg-gnomad

Hail helper functions for the gnomAD project and Translational Genomics Group

170 102 32
cumbof
metasbt

A scalable framework for automatically indexing microbial genomes and accurately characterizing metagenome-assembled genomes with Sequence Bloom Trees

114 24 3
hunglin59638
bio-juno

read data generator

72 0 0
    • Original data from PyPI, GitHub, and OSV; downloads served through ClickHouse
    • Sources & methodology