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Genome Scale Python Packages

Python packages with the GitHub topic genome-scale. Sorted by monthly downloads, with stars and forks.
cdanielmachado
carveme

CarveMe: genome-scale metabolic model reconstruction

1K 223 69
MetExplore
miom

Constraint-based modeling of metabolism using Mixed Integer Optimization

338 12 2
findCP
findcpcli

findCP CLI package - find ChokePoint reactions in genome-scale metabolic models

198 3 0
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