PyRank

Genome Scale Python Packages

Python packages with the GitHub topic genome-scale. Sorted by relevance, with stars and monthly downloads.
cdanielmachado
carveme

CarveMe: genome-scale metabolic model reconstruction

2K 204 64
MetExplore
miom

Mixed Integer Optimization for Metabolism

360 12 2
findCP
findcpcli

findCP CLI package - find ChokePoint reactions in genome-scale metabolic models

327 3 0