Gene Ontology Python Packages

goatools

Python library to handle Gene Ontology (GO) terms

ontobio

python library for working with ontologies and ontology associations

goenrich

GO enrichment with python -- pandas meets networkx

gokit

Command-line toolkit for GO enrichment analysis

biolinkmg

Schema and generated objects for biolink data model and upper ontology

fastdtlmapper

Genome-wide gene gain/loss mapping tool using DTL(Duplication-Transfer-Loss) reconciliation method

gopiscator

GOpiscator is a command-line tool for performing gene set enrichment analysis using the Gene Ontology (GO) database.

bio2bel-go

A package for converting GO to BEL

sceptr-profiling

Statistical Characterisation of Expression Profiles in Transcriptomes