fva
An integrated visual environment for metabolic modeling methods such as FBA, FVA and Elementary Flux Modes, and advanced features such as thermodynamic methods, extended Minimal Cut Sets, OptKnock, RobustKnock, OptCouple and more!
findCP core package - find ChokePoint reactions in genome-scale metabolic models
findCP CLI package - find ChokePoint reactions in genome-scale metabolic models