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Fungi Python Packages

Python packages with the GitHub topic fungi. Sorted by relevance, with stars and monthly downloads.
Changwanseo
funvip

Fungal Validation & Identification Pipeline

2K 15 0
Changwanseo
genmine

GenBank Record downloader for taxonomists

685 8 0
nextgenusfs
amptk

AMPtk: amplicon tool kit

651 39 13
joshuaowalker
pyitsx

Fast ITS region detection and extraction using in-process HMM search

426 0 0
adamtaranto
derip2

Reconstruct ancestral state sequences of fungal repeat families by correcting for RIP-like mutations. Mask RIP or deamination events from alignments.

413 0 0
ccdmb
catastrophy

CATAStrophy predicts filamentous plant pathogen lifestyle characteristics based on their CAZyme composition.

337 6 0
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