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Fine Mapping Python Packages

Python packages with the GitHub topic fine-mapping. Sorted by monthly downloads, with stars and forks.
michael-denyer
pylocuszoom

pyLocusZoom -- publication-ready GWAS visualization in Python: LocusZoom-style regional association plots with LD coloring, gene tracks and recombination overlays, plus Manhattan, QQ, Miami, eQTL, fine-mapping, PheWAS and forest plots. Dog and cat genomes built in.

5K 2 0
mancusolab
sushie

Software to perform multi-ancestry SNP fine-mapping on molecular data

1K 34 8
Jianhua-Wang
easyfinemap

user-friendly pipeline for GWAS fine-mapping

500 14 4
    • Original data from PyPI, GitHub, and OSV; downloads served through ClickHouse
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