Fair Python Packages

sssom-pydantic

An opinionated implementation of a simple subset of SSSOM, based on Pydantic

biomero

BIOMERO.analyzer - A python library for easy connecting between OMERO (jobs) and a Slurm cluster

signposting

Python library for parsing FAIR Signposting links

text2term

a tool for mapping free-text descriptions of entities to ontology terms

howfairis

Command line tool to analyze a GitHub or GitLab repository's compliance with the fair-software.eu recommendations

omnipy

Omnipy is a high level Python library for type-driven data wrangling and scalable workflow orchestration (under development)

somesy

A CLI tool for synchronizing software project metadata

fairspec-dataset

Fairspec TypeScript is a fast data management framework built on top of the Fairspec standard and Polars DataFrames

scipion-em-modelangelo

Scipion plugin for modelangelo.

fair-cli

Command line interface for the FAIR Data Pipeline

fairspec-metadata

Fairspec Python is a fast data management framework built on top of the Fairspec standard and Polars DataFrames

bhklab-project-template

Setup FAIR and DMP compliant projects with one command

epyr-tools

Electron Paramagnetic Resonance (EPR) Tools in Python

deep-code

deep-code is a lightweight python tool that aid integration of DeepESDL datasets, experiments with EarthCODE.

fairspec

Fairspec Python is a fast data management framework built on top of the Fairspec standard and Polars DataFrames

fairspec-table

Fairspec Python is a fast data management framework built on top of the Fairspec standard and Polars DataFrames

fairspec-library

Fairspec Python is a fast data management framework built on top of the Fairspec standard and Polars DataFrames

snapquery

FAIR Management of Query Sets to Mitigate Query Rot in Knowledge Graphs

fairspec-terminal

Fairspec Python is a fast data management framework built on top of the Fairspec standard and Polars DataFrames

fairspec-extension

Fairspec Extension is a repository template for rapid Fairspec extension development

modos

SMOC Multi-Omics Digital Object System API

django-signposting

Add FAIR signpostings to response headers in Django

fairspec-cardealer

Fairspec Cardealer is a data exchange format for car dealerships. It is developed on top of the Fairspec standard

nmrformd

NMRforMD is a python script for the calculation of NMR relaxation time T1 and T2 from molecular dynamics trajectory file.