PyRank

Epidemic Simulations Python Packages

Python packages with the GitHub topic epidemic-simulations. Sorted by relevance, with stars and monthly downloads.
metawards
metawards

MetaWards disease metapopulation analysis and modelling software. Professional geographical SIR model with a flexible plugin architecture to support complex scenario modelling

2K 14 6
lisphilar
covsirphy

CovsirPhy: Python library for COVID-19 analysis with phase-dependent SIR-derived ODE models.

2K 112 44
ryansmcgee
seirsplus

Models of SEIRS epidemic dynamics with extensions, including network-structured populations, testing, contact tracing, and social distancing.

803 678 220
rajeshrinet
pyross

PyRoss: inference, forecasts, and optimised control of epidemiological models in Python. github.com/rajeshrinet/pyross

476 167 57
lueckem
sponet

Spreading Processes on Networks

465 4 2
DataForScience
epidemik

Compartmental Epidemic Models in Python

404 15 2
healthbadge
episimmer

Episimmer is an Epidemic Simulation Framework for Decision Support. It is a highly flexible system that can be easily configured to help take decisions during an epidemic in closed communities like university campuses and gated communities.

288 16 3
QuanticPony
compartmental

Vectored GPU based compartmental simulations. Easy to use. With some ABC (Approximate Bayesian Computation) utils

247 0 0
lueckem
cnvm

Continuous-time Noisy Voter Model (CNVM) of social dynamics.

198 0 0
miladrezanezhad
sir-epidemic-simulator-milad

A complete epidemic modeling suite with SIR/SEIR models, network simulation, ML prediction, and Streamlit dashboard

146 10 0
nwlandry
hypercontagion

Library for epidemics on hypergraphs

144 13 3
miladrezanezhad
sir-epidemic

A complete epidemic modeling suite with SIR/SEIR models, network simulation, ML prediction, and Streamlit dashboard

142 10 0