Epidemic Simulations Python Packages

covsirphy

COVID-19 data analysis with phase-dependent SIR-derived ODE models

metawards

MetaWards disease metapopulation analysis and modelling software. Professional geographical SIR model with a flexible plugin architecture to support complex scenario modelling

seirsplus

Models of SEIRS epidemic dynamics with extensions, including network-structured populations, testing, contact tracing, and social distancing.

sponet

Spreading Processes on Networks

pyross

PyRoss: inference, forecasts, and optimised control of epidemiological models in Python. github.com/rajeshrinet/pyross

sir-epidemic-simulator-milad

SIR/SEIR epidemic simulator with network spread, ML forecasting, and scenario comparison

sir-epidemic

SIR/SEIR epidemic simulator with network spread, ML forecasting, and scenario comparison

epidemik

Compartmental Epidemic Models in Python

compartmental

Compartmental models with ABC inference optimized for GPU use

episimmer

Episimmer is an Epidemic Simulation Framework for Decision Support. It is a highly flexible system that can be easily configured to help take decisions during an epidemic in closed communities like university campuses and gated communities.

cnvm

Continuous-time Noisy Voter Model (CNVM) of social dynamics.

hypercontagion

Library for epidemics on hypergraphs