PyRank

Enzyme Python Packages

Python packages with the GitHub topic enzyme. Sorted by relevance, with stars and monthly downloads.
althonos
pyjess

Cython bindings and Python interface to Jess, a 3D template matching software for protein structures. Now 10x faster!

10K 11 0
pujanajmera
pycpet

Computing Protein Electric Field Topology in python, built for high-throughput accelerated calculations

2K 13 1
t-0hmura
pdb2reaction

End-to-end Reaction-Path Modeling from PDB Structures Using Machine-Learning Interatomic Potentials

1K 15 2
t-0hmura
mlmm-toolkit

Machine‑Learning / Molecular‑Mechanics (ML/MM) hybrid calculator and CLI toolset for Mechanistic Investigation of Enzymatic Reactions.

1K 17 5
rayhackett
enzymm

EnzyMM - Enzyme Motif Miner - Geometric matching of catalytic motifs in protein structures.

1K 41 2
sysbiolux
wildkcat

Extract, Retrieve and Predict kcat values for a metabolic model

991 8 0
ArnaudBelcour
bigecyhmm

Predict enzymatic impact on biogeochemical cycles from proteomes.

807 5 0
willfinnigan
kinetics

Python package for modelling enzyme reactions using Monte carlo sampling from parameter distributions

478 33 6
robaina
brendapyrser

A Python parser for the BRENDA database

250 33 11