PyRank

Enzyme Python Packages

Python packages with the GitHub topic enzyme. Sorted by relevance, with stars and monthly downloads.
althonos
pyjess

Cython bindings and Python interface to Jess, a 3D template matching software for protein structures. Now 10x faster!

9K 10 0
t-0hmura
pdb2reaction

pdb2reaction - Automated enzyme reaction path elucidation from PDB structures

2K 10 2
sysbiolux
wildkcat

Extract, Retrieve and Predict kcat values for a metabolic model

2K 6 0
pujanajmera
pycpet

Computing Protein Electric Field Topology in python, built for high-throughput accelerated calculations

928 13 1
rayhackett
enzymm

EnzyMM - Enzyme Motif Miner - Geometric matching of catalytic motifs in protein structures.

618 39 2
t-0hmura
mlmm-toolkit

Machine‑Learning / Molecular‑Mechanics (ML/MM) hybrid calculator and CLI toolset for Mechanistic Investigation of Enzymatic Reactions.

483 16 4
robaina
brendapyrser

Tools to parse the BRENDA database

462 33 10
willfinnigan
kinetics

Python package for modelling enzyme reactions using Monte carlo sampling from parameter distributions

425 33 6
ArnaudBelcour
bigecyhmm

Predict biogeochemical cycles from protein fasta files.

308 5 0