Drug Repurposing Python Packages

uniprot-mcp-server

Model Context Protocol server for UniProt — Swiss-Prot and TrEMBL protein knowledgebase. 41 tools across 8 families with per-query SHA-256 provenance verification and offline replay.

deeppurpose

A Deep Learning Toolkit for DTI, Drug Property, PPI, DDI, Protein Function Prediction (Bioinformatics)

nordic

Network-Oriented Repurposing of Drugs Python Package

benchscofi

Package which contains implementations of published collaborative filtering-based algorithms for drug repurposing.

stanscofi

Package for STANdard drug Screening by COllaborative FIltering. Performs benchmarks against datasets and SotA algorithms, and implements training, validation and testing procedures.

jeli

Joint Embedding-classifier Learning for improved Interpretability (JELI)