PyRank

Dna Methylation Python Packages

Python packages with the GitHub topic dna-methylation. Sorted by monthly downloads, with stars and forks.
lhqing
allcools

Toolkit for single-cell DNA methylation analysis.

3K 50 22
LabShengLi
nanome-jax

NANOME pipeline (Nanopore long-read sequencing consensus DNA methylation detection method and pipeline)

472 34 10
andrewdavidsmith
pyxfr

The transferase system for retrieving methylome data from methbase

388 4 0
qgenlab
diffmethyltools

An automated, end-to-end Python pipeline for differential DNA methylation analysis, region annotation, and visualization.

301 7 2
eliopato
pylluminator

Python package for processing and analyzing Illumina DNA methylation data

299 12 1
anders-biostat
methscan

Python package with CLI for the analysis of single cell methylation data.

284 20 8
eliopato
pylluminator-modern

Python package for processing and analyzing Illumina DNA methylation data

60 12 1
wrab12
stablednam

StableDNAm: stable and efficient DNA methylation prediction with adaptive feature correction learning (BMC Genomics, 2023)

54 1 0