Diffusion Maps Python Packages

palantir

Single cell trajectory detection

topometry-nosc

An independently maintained, heavily modified fork of TopOMetry: geometry-first topological dimensionality reduction and manifold learning.

pydesigner-dwi

A hands-free DTI, DKI, FBI and FBWM preprocessing pipeline. Information on algorithms and preprocessing steps are available at https://www.biorxiv.org/content/10.1101/2021.10.20.465189v1 A video tutorial on PyDesigner and its usage is now available at https://www.youtube.com/watch?v=mChQFuQqX3k

tati

Sampling-based approach to analyse neural networks using TensorFlow