Cryoet Python Packages

copick

Definitions for a collaborative cryoET annotation tool.

4K 35 7

copick-utils

Utilities for copick

2K 2 1

copick-torch

Torch utilities for copick

1K 1 1

copick-mcp

MCP-server for the copick CLI.

710 0 0

tomo-toolshed

A small, growing collection of lightweight cryo-ET file/CLI tools focused on the WarpTools pipeline.

314 2 1

surforama

a tool for using surfaces to explore volumetric data in napari

248 22 6

zarr-particle-tools

Subtomogram averaging tools for OME-Zarr tilt series.

185 1 1

cellcanvas

Interactive machine learning for cryogenic electron tomography (cryoET) data

71 0 1

cryocanvas

A tool to support interactive machine learning for cryoET data

61 12 5