Cryoem Python Packages

topaz-em

Pipeline for particle picking in cryo-electron microscopy images using convolutional neural networks trained from positive and unlabeled examples. Also featuring micrograph and tomogram denoising with DNNs.

superpose3d

register 3D point clouds using rotation, translation, and scale transformations.

kltpicker

KLT picker: Particle picking using data-driven optimal templates (Python version)

scipion-em-modelangelo

Scipion plugin for ModelAngelo: an automatic atomic model building program for cryo-EM maps. With or without providing a sequence.