Cryoem Python Packages

topaz-em

Pipeline for particle picking in cryo-electron microscopy images using convolutional neural networks trained from positive and unlabeled examples. Also featuring micrograph and tomogram denoising with DNNs.

scipion-em-modelangelo

Scipion plugin for ModelAngelo: an automatic atomic model building program for cryo-EM maps. With or without providing a sequence.

superpose3d

register 3D point clouds using rotation, translation, and scale transformations.

kltpicker

KLT picker: Particle picking using data-driven optimal templates (Python version)