PyRank

Cryo Et Python Packages

Python packages with the GitHub topic cryo-et. Sorted by relevance, with stars and monthly downloads.
hanjinliu
himena-relion

A modern RELION GUI

2K 6 0
brisvag
blik

Python tool for visualising and interacting with cryo-ET and subtomogram averaging data.

1K 30 10
MPI-Dortmund
tomotwin-cryoet

Picking procedure for cryo em tomography

837 44 10
Lucaslab-Berkeley
leopard-em

Two-Dimensional Template Matching implemented in Python

629 16 12
ZhenHuangLab
cryocofi

CarbOn FIlm detector for cryo-EM images

404 0 0
chanzuckerberg
octopi

Search for Protein 3D Coordinates in CryoET Tomograms

331 9 4
scipion-em
scipion-em-membrain

Plugin to use membrain within the Scipion framework

310 0 0
deep-finder
napari-deepfinder

A napari plugin for the DeepFinder library which includes display, annotation, target generation, segmentation and clustering functionalities. An orthoslice view has been added for an easier visualisation and annotation process.

175 3 1
bwmr
napari-segselect

Napari Plugin to clean membrain-seg segmentations

160 2 0
ZhenHuangLab
imod2relion

A tool reading IMOD points, obtaining particles' info and generating .star file for RELION

144 4 1
ZhenHuangLab
tbl2star

A tool converting DYNAMO table files(.tbl) to RELION star files(.star)

108 3 0
gutsche-lab
peepingtom

Python tool for visualising and interacting with cryo-ET and subtomogram averaging data.

105 30 10