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Crispr Cas9 Python Packages

Python packages with the GitHub topic crispr-cas9. Sorted by relevance, with stars and monthly downloads.
ArcInstitute
screenpro2

Flexible analysis of high-content CRISPR screening

2K 32 7
Russel88
cctyper

CRISPRCasTyper: Automatic detection and subtyping of CRISPR-Cas operons

1K 108 22
lucapinello
crispresso

Software pipeline for the analysis of CRISPR-Cas9 genome editing outcomes from sequencing data

629 141 58
hiddeoff
crisprzip

A kinetic model of CRISPR-Cas target recognition.

408 3 2
YosefLab
cassiopeia-lineage

Single Cell Lineage Reconstruction with Cas9-Enabled Lineage Recorders

372 98 29
Physics4MedicineLab
crispr-cats

Comparing Cas Activities by Target Superimposition (CATS)

352 3 0
snehaiasri
acrcasppi-ml

Prediction of protein-protein interaction between anti-crispr protein (acr) and CRISPR-associated (cas) protein using machine learning algorithm

215 0 0
babinyurii
crispr-cas9

NGS data analysis scripts for HBV elimination research group

175 4 3
jordiabante
biodive

Discovery of k-mer sequences associated with high rates of sequence diversification.

167 6 0
bmds-lab
crispr-da

Adapting CRISPR gRNA design for detection assays.

121 1 0
niekwit
pycrispr

Pip package for CRISPR-Cas9 screen analysis

105 5 1
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