Crispr Cas9 Python Packages

screenpro2

Flexible analysis of high-content CRISPR screening

cctyper

CRISPRCasTyper: Automatic detection and subtyping of CRISPR-Cas operons

crispresso

Software pipeline for the analysis of CRISPR-Cas9 genome editing outcomes from sequencing data

crisprzip

A kinetic model of CRISPR-Cas target recognition.

cassiopeia-lineage

Single Cell Lineage Reconstruction with Cas9-Enabled Lineage Recorders

crispr-cats

Comparing Cas Activities by Target Superimposition (CATS)

acrcasppi-ml

Prediction of protein-protein interaction between anti-crispr protein (acr) and CRISPR-associated (cas) protein using machine learning algorithm

crispr-cas9

NGS data analysis scripts for HBV elimination research group

biodive

Discovery of k-mer sequences associated with high rates of sequence diversification.

crispr-da

Adapting CRISPR gRNA design for detection assays.

pycrispr

Pip package for CRISPR-Cas9 screen analysis