PyRank

Cram Python Packages

Python packages with the GitHub topic cram. Sorted by monthly downloads, with stars and forks.
dnncha
turbo-picard

Picard-compatible Rust tools for faster SAM/BAM/CRAM, VCF, duplicate-marking and sequencing-QC workflows.

3K 4 0
prysk
prysk

Functional tests for command line applications

3K 38 15
sbslee
fuc

Frequently used commands in bioinformatics

2K 59 8
cmdoret
htslurp

slurp noodles-htsget streams into python

232 1 0
AlexanderM-M
semantiseq

Semantic comparison for BAM/CRAM and VCF/BCF files, independent of record order, compression, and provenance metadata.

186 0 0
victormar1
rubam

Pure-Rust BAM/VCF/BCF depth, pileup, variants & stats with Python bindings — native Linux/macOS/Windows wheels, pysam-parity, no htslib.

179 5 0
Nicoretti
prysk-windows

Functional tests for command line applications

58 38 15
AlexanderM-M
gendiff

Semantic comparison for BAM/CRAM and VCF/BCF files, independent of record order, compression, and provenance metadata.

3 0 0