contigs
✨🧬 Refined binning of metagenomic contigs using assembly graphs
Identification & characterization of bacterial plasmid-borne contigs from short-read draft assemblies.
Pandoo: a pipeline of tools for bacterial genomics.
☯️🧬 Refined and Overlapped Binning of Metagenomic Contigs Using Assembly Graphs
PlasFlow - predicting plasmid sequences in metagenomic data
Redundans is a pipeline that assists an assembly of heterozygous/polymorphic genomes.