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Contigs Python Packages

Python packages with the GitHub topic contigs. Sorted by relevance, with stars and monthly downloads.
metagentools
graphbin

✨🧬 Refined binning of metagenomic contigs using assembly graphs

384 98 10
oschwengers
cb-platon

Identification & characterization of bacterial plasmid-borne contigs from short-read draft assemblies.

375 122 15
schultzm
pandoo

Pandoo: a pipeline of tools for bacterial genomics.

333 1 2
metagentools
graphbin2

☯️🧬 Refined and Overlapped Binning of Metagenomic Contigs Using Assembly Graphs

329 37 4
smaegol
plasflow

PlasFlow - predicting plasmid sequences in metagenomic data

235 111 27
lpryszcz
redundans

Redundans is a pipeline that assists an assembly of heterozygous/polymorphic genomes.

202 183 23
    • Data from PyPI, GitHub, ClickHouse, and BigQuery