PyRank

Codon Optimization Python Packages

Python packages with the GitHub topic codon-optimization. Sorted by relevance, with stars and monthly downloads.
Edinburgh-Genome-Foundry
python-codon-tables

:bar_chart: Codon usage tables in code-friendly format + Python bindings

127K 43 11
Edinburgh-Genome-Foundry
dnachisel

:pencil2: A versatile DNA sequence optimizer

120K 274 52
adibvafa
codontransformer

CodonTransformer (2M+ Downloads); The tool for codon optimization, optimizing DNA for protein expression

6K 215 31
eijex
factorforge-cds

Open-source CDS design and pre-synthesis sequence review for plant gene constructs.

6K 4 1
retospect
phagetrix

Optimizer for degenerate codon use in phage library generation

591 2 0
koeng101
dnadesign

Python bindings for dnadesign

532 38 1