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Coarse Graining Python Packages

Python packages with the GitHub topic coarse-graining. Sorted by relevance, with stars and monthly downloads.
marrink-lab
polyply

Generate input parameters and coordinates for atomistic and coarse-grained simulations of polymers, ssDNA, and carbohydrates

1K 192 37
amepproject
amep

Python data analysis package for active and soft matter simulations

634 25 7
GMPavanLab
swarm-cg

Swarm-CG: Automatic Parametrization of Bonded Terms in MARTINI-based Coarse-Grained Models of Simple to Complex Molecules via Fuzzy Self-Tuning Particle Swarm Optimization

484 49 13
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