coarse-grained
COBY (Coarse Grained System Builder) can be used to create coarse-grained systems in Martini 3
Swarm-CG: Automatic Parametrization of Bonded Terms in MARTINI-based Coarse-Grained Models of Simple to Complex Molecules via Fuzzy Self-Tuning Particle Swarm Optimization
Massively parallel hybrid particle-field molecular dynamics in Python.
Differentiable molecular simulation of proteins with a coarse-grained potential
