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Co Expression Python Packages

Python packages with the GitHub topic co-expression. Sorted by monthly downloads, with stars and forks.
mikelkou
favapy

Functional Associations using Variational Autoencoders

458 43 5
lingfeiwang
normalisr

Causal inference, differential expression, and co-expression for scRNA-seq

373 21 4
heart-gen
isograph

Python toolkit for discovering isoform-switch and splicing modules from bulk RNA-seq using gene-aware latent network inference.

271 1 0
oubounyt
scanet

SCANet is a python package that incorporates the inference of gene co-expression networks from single-cell gene expression data

238 7 1
LinkageIO
camoco-cob

The gene CO-expression Browser

181 3 9
mikelkou
fava-tool

Functional Associations using Variational Autoencoders

0 43 5
    • Original data from PyPI, GitHub, and OSV; downloads served through ClickHouse
    • Sources & methodology