co-expression
Causal inference, differential expression, and co-expression for scRNA-seq
Functional Associations using Variational Autoencoders
A Python framework for discovering isoform-switch and splicing modules from bulk RNA-seq by combining gene-local compositional modeling with splice-graph-aware latent network inference.
SCANet is a python package that incorporates the inference of gene co-expression networks from single-cell gene expression data
The gene CO-expression Browser