cnv
Infer copy number variation (CNV) from scRNA-seq data. Plays nicely with Scanpy.
Python toolkit for parsing, processing, and analysis of Illumina methylation array IDAT files
Misc Python modules developed and used by the yfish group
Simulator of SNVs and CNAs in single-cell DNA sequencing
A simple module for diagnostic variant information parsing
Within-sample CNV calling
A high-accuracy tool for integrating scDNA-seq and scRNA-seq data