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Clinvar Python Packages

Python packages with the GitHub topic clinvar. Sorted by monthly downloads, with stars and forks.
CrossRead
scholion

Your genome, labs, prescriptions and wearables sit in silos that never compare notes, so contradictions go unnoticed. This reads them against each other, with the source behind every answer — one local engine behind a web UI, a CLI, a Claude skill, and an Ouroboros plugin.

8K 4 0
smaniches
alphafold-sovereign-mcp

BioMed MCP over AlphaFold DB + 8 public sources, with SQLite knowledge graph, offline mode, and explicit clinical-use limits.

5K 4 2
allelix
allelix

Open-source genotype analysis toolkit. Format-agnostic ingestion, database-agnostic annotation, offline-first.

939 37 2
bihealth
clinvar-this

ClinVar Submission via API Made Easy

875 11 2
ding-lab
charger

Characterization of Germline variants

185 102 37
    • Original data from PyPI, GitHub, and OSV; downloads served through ClickHouse
    • Sources & methodology