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Clinical Trials Python Packages

Python packages with the GitHub topic clinical-trials. Sorted by relevance, with stars and monthly downloads.
genomoncology
biomcp-python

BioMCP: Biomedical Model Context Protocol

31K 508 102
dermatologist
pyomop

Python package for managing OHDSI clinical data models. Includes support for LLM based plain text queries, MCP server and FHIR import.

12K 63 11
clinicedc
edc

A framework for multisite longitudinal clinical trials built on Django

8K 34 10
ambition-trial
ambition-subject

(P.I. Joe Jarvis) Subject models and views for Ambition

7K 1 0
jvfe
pytrials

Python package that wraps around the ClinicalTrials.gov API

6K 60 20
effect-trial
effect-edc

Fluconazole plus flucytosine vs. fluconazole alone for cryptococcal antigen-positive patients identified through screening: A phase III randomised controlled trial

6K 1 1
clinicedc
edc-appointment

Add scheduled study appointments and appointment management to your clinical trial app

5K 0 3
genomoncology
biomcp-cli

BioMCP: Biomedical Model Context Protocol

4K 508 102
clinicedc
edc-visit-tracking

Track study participant visits and ensure documented cover for all data collection on participants

4K 1 4
clinicedc
edc-dashboard

Core classes for dashboards in clincedc/edc projects. e.g. Listboard, SubjectDashboard

3K 1 3
clinicedc
edc-export

Export Edc models to CSV

3K 0 2
clinicedc
edc-lab

Lab module to Receive, Process, Pack, Verify, Ship

3K 0 1
cthoyt
clinicaltrials-downloader

Download and process ClinicalTrials.gov

3K 1 0
clinicedc
edc-adverse-event

Adverse Event classes

3K 0 1
ambition-trial
ambition-screening

Determine a subject's eligibility

3K 1 0
clinicedc
edc-locator

Simple base classes for participant locator form and processes

3K 0 3
clinicedc
edc-data-manager

Data manager administrative models and classes

2K 1 1
clinicedc
edc-registration

Add a master patient record and registration services to your app

2K 1 1
alethiotx
alethiotx

Alethio Therapeutics Python Toolkit

2K 0 0
clinicedc
edc-pdutils

Use pandas with clinicedc/edc projects

2K 0 1
clinicedc
edc-reportable

Reportable clinic events, reference ranges, grading for clinicedc/edc projects

2K 0 1
ambition-trial
ambition-visit-schedule

Ambition Visit Schedule

2K 1 1
clinicedc
edc-facility

Define clinic facilities for clinicedc/edc projects

2K 0 3
microqueryhq
microquery-mcp

MCP server for microquery.dev — SQL over FDA, SEC, PubMed, blockchain, and more

2K 0 0
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