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Clinical Informatics Python Packages

Python packages with the GitHub topic clinical-informatics. Sorted by monthly downloads, with stars and forks.
opentargets
opentargets-mira

Multi-source Indication & Report Analytics

3K 10 3
omopHub
omophub

Python SDK for OMOP/OHDSI vocabularies - query 11M+ medical concepts across SNOMED, ICD-10, RxNorm, LOINC & 120+ terminologies via simple API

2K 7 3
PFreda-Lab
okf-loremaster

Multi-agentic biomedical literature evidence extraction, curation, and summarization from PubMed/PMC in Open Knowledge Format (OKF) for downstream machine learning, feature selection, and agentic applications.

414 2 0
tunabirgun
omicau

Omics Audit: reproducible, leakage-safe multi-omics data-audit and fusion-benchmarking CLI.

268 0 0
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