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Cfdna Python Packages

Python packages with the GitHub topic cfdna. Sorted by relevance, with stars and monthly downloads.
epifluidlab
finaletoolkit

FinaleToolkit is a package and standalone program to extract fragmentation features of cell-free DNA from paired-end sequencing data.

2K 41 17
ChaorongC
mesa-cfdna

A flexible and sensitive method for capturing and integrating multimodal epigenetic information from cell-free DNA (cfDNA) using a single experimental assay.

846 3 1
BesenbacherLab
cfdnalab

Ultra-fast command line tools for extracting bias-corrected fragmentation patterns from cell-free DNA

764 5 0
BesenbacherLab
lionheart

LIONHEART detects cancer from whole genome sequenced plasma cell-free DNA.

658 11 3
ShujiaHuang
basevar

This is the official development repository for BaseVar, which call variants for large-scale ultra low-pass (<1.0x) WGS data, especially for NIPT data

163 28 8
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