Cancer Research Python Packages

cellpyability

Software for the automated analysis of in cellulo high-throughput drug screening

cancer-data

A unified downloader+preprocessor for cancer genomics datasets

cfdnalab

Ultra-fast command line tools for extracting bias-corrected fragmentation patterns from cell-free DNA

acscend

A deep learning tool for bulk RNA-seq deconvolution and Stem Cells Sub-Class prediction.

lyroi

nnU-Net-based Lymphoma Total Metabolic Tumor Volume Segmentation

digipathai

Deep Learning toolbox for WSI (digital histopatology) analysis

pycandi

CanDI - A global cancer data integrator