Biotechnology Python Packages

codontransformer

CodonTransformer (2M+ Downloads); The tool for codon optimization, optimizing DNA for protein expression

biocomputing

pip install biocomputing

isogroup

Data processing tool for automatic extraction and annotation of isotopic information collected by mass spectrometry

dasi

A Python molecular biology CAD tool with a dead-simple user interface

xad

High-Performance Automatic Differentiation for Python

dspp-keras

Protein order and disorder data for Keras, Tensor Flow and Edward frameworks with automated update cycle made for continuous learning applications.

sequence-alignment-by-cross-correlation

The project is based on the paper Sequence Alignment by Cross-Correlation and bridges the gap between the knowledge and an useful implementation.