PyRank

Biomedical Informatics Python Packages

Python packages with the GitHub topic biomedical-informatics. Sorted by monthly downloads, with stars and forks.
cancervariants
gene-normalizer

Services and guidelines for normalizing genes

4K 3 4
cancervariants
disease-normalizer

Services and guidelines for normalizing disease terms

2K 7 0
Sage-Bionetworks
schematicpy

Package for biomedical data model and metadata ingress management

1K 28 25
nlpie
biomedicus

BioMedICUS: A biomedical and clinical NLP engine.

913 21 8
chykoushik
bioconverge

Python framework for biological score integration, patient stratification, concordance analysis, archetype discovery, and validation-aware computational biology.

699 0 0
ductho-le
wavedl

A Scalable Deep Learning Framework for Wave-Based Inverse Problems

470 50 7
nlpie
biomedicus-client

BioMedICUS: A biomedical and clinical NLP engine.

355 21 8
nanobiolog
neurofhir

Geometric Deep Learning for Clinical Informatics: Converting FHIR to Temporal-Hierarchical Graph Tensors

133 0 0
AnthonyMRios
pymetamap

Python wraper for MetaMap

117 173 62
raghavagps
ntxpred2

NTxPred2: An improved method for predicting neurotoxicity of peptides and proteins

83 5 2
Sage-Bionetworks
schematic-test

Package for biomedical data model and metadata ingress management

53 28 25